Xylem Cell Wall Formation in Pioneer Roots and Stems of Populus trichocarpa (Torr. & Gray).
Identifieur interne : 000632 ( Main/Exploration ); précédent : 000631; suivant : 000633Xylem Cell Wall Formation in Pioneer Roots and Stems of Populus trichocarpa (Torr. & Gray).
Auteurs : Katarzyna Marzec-Schmidt [Pologne] ; Agnieszka Ludwik W [Pologne] ; Natalia Wojciechowska [Pologne] ; Anna Kasprowicz-Malu Ki [Pologne] ; Joanna Mucha [Pologne] ; Agnieszka Bagniewska-Zadworna [Pologne]Source :
- Frontiers in plant science [ 1664-462X ] ; 2019.
Abstract
Regulation of gene expression, as determined by the genetics of the tree species, is a major factor in determining wood quality. Therefore, the identification of genes that play a role in xylogenesis is extremely important for understanding the mechanisms shaping the plant phenotype. Efforts to develop new varieties characterized by higher yield and better wood quality will greatly benefit from recognizing and understanding the complex transcriptional network underlying wood development. The present study provides a detailed comparative description of the changes that occur in genes transcription and the biosynthesis of cell-wall-related compounds during xylogenesis in Populus trichocarpa pioneer roots and stems. Even though results of microarray analysis indicated that only approximately 10% of the differentially expressed genes were common to both organs, many fundamental mechanisms were similar; e.g. the pattern of expression of genes involved in the biosynthesis of cell wall proteins, polysaccharides, and lignins. Gas chromatography time-of-flight mass spectrometry (GC-TOF-MS) shows that the composition of monosaccharides was also very similar, with an increasing amount of xylose building secondary cell wall hemicellulose and pectins, especially in the stems. While hemicellulose degradation was typical for stems, possibly due to the intensive level of cell wall lignification. Notably, the main component of lignins in roots were guiacyl units, while syringyl units were dominant in stems, where fibers are especially needed for support. Our study is the first comprehensive analysis, at the structural and molecular level, of xylogenesis in under- and aboveground tree parts, and clearly reveals the great complexity of molecular mechanisms underlying cell wall formation and modification during xylogenesis in different plant organs.
DOI: 10.3389/fpls.2019.01419
PubMed: 31781142
PubMed Central: PMC6861220
Affiliations:
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Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań</wicri:regionArea><wicri:noRegion>Poznań</wicri:noRegion></affiliation></author><author><name sortKey="Ludwik W, Agnieszka" sort="Ludwik W, Agnieszka" uniqKey="Ludwik W A" first="Agnieszka" last="Ludwik W">Agnieszka Ludwik W</name><affiliation wicri:level="1"><nlm:affiliation>Department of Biotechnology, Faculty of Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Department of Biotechnology, Faculty of Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, 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Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Department of Molecular and Cellular Biology, Faculty of Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań</wicri:regionArea><wicri:noRegion>Poznań</wicri:noRegion></affiliation></author><author><name sortKey="Mucha, Joanna" sort="Mucha, Joanna" uniqKey="Mucha J" first="Joanna" last="Mucha">Joanna Mucha</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Ecology, Institute of Dendrology, Polish Academy of Science, Kórnik, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Laboratory of Ecology, Institute of Dendrology, Polish Academy of Science, Kórnik</wicri:regionArea><wicri:noRegion>Kórnik</wicri:noRegion></affiliation></author><author><name sortKey="Bagniewska Zadworna, Agnieszka" sort="Bagniewska Zadworna, Agnieszka" uniqKey="Bagniewska Zadworna A" first="Agnieszka" last="Bagniewska-Zadworna">Agnieszka Bagniewska-Zadworna</name><affiliation wicri:level="1"><nlm:affiliation>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań, Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań</wicri:regionArea><wicri:noRegion>Poznań</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in plant science</title><idno type="ISSN">1664-462X</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Regulation of gene expression, as determined by the genetics of the tree species, is a major factor in determining wood quality. Therefore, the identification of genes that play a role in xylogenesis is extremely important for understanding the mechanisms shaping the plant phenotype. Efforts to develop new varieties characterized by higher yield and better wood quality will greatly benefit from recognizing and understanding the complex transcriptional network underlying wood development. The present study provides a detailed comparative description of the changes that occur in genes transcription and the biosynthesis of cell-wall-related compounds during xylogenesis in <i>Populus trichocarpa</i> pioneer roots and stems. Even though results of microarray analysis indicated that only approximately 10% of the differentially expressed genes were common to both organs, many fundamental mechanisms were similar; e.g. the pattern of expression of genes involved in the biosynthesis of cell wall proteins, polysaccharides, and lignins. Gas chromatography time-of-flight mass spectrometry (GC-TOF-MS) shows that the composition of monosaccharides was also very similar, with an increasing amount of xylose building secondary cell wall hemicellulose and pectins, especially in the stems. While hemicellulose degradation was typical for stems, possibly due to the intensive level of cell wall lignification. Notably, the main component of lignins in roots were guiacyl units, while syringyl units were dominant in stems, where fibers are especially needed for support. Our study is the first comprehensive analysis, at the structural and molecular level, of xylogenesis in under- and aboveground tree parts, and clearly reveals the great complexity of molecular mechanisms underlying cell wall formation and modification during xylogenesis in different plant organs.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">31781142</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-462X</ISSN><JournalIssue CitedMedium="Print"><Volume>10</Volume><PubDate><Year>2019</Year></PubDate></JournalIssue><Title>Frontiers in plant science</Title><ISOAbbreviation>Front Plant Sci</ISOAbbreviation></Journal><ArticleTitle>Xylem Cell Wall Formation in Pioneer Roots and Stems of <i>Populus trichocarpa</i> (Torr. & Gray).</ArticleTitle><Pagination><MedlinePgn>1419</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fpls.2019.01419</ELocationID><Abstract><AbstractText>Regulation of gene expression, as determined by the genetics of the tree species, is a major factor in determining wood quality. Therefore, the identification of genes that play a role in xylogenesis is extremely important for understanding the mechanisms shaping the plant phenotype. Efforts to develop new varieties characterized by higher yield and better wood quality will greatly benefit from recognizing and understanding the complex transcriptional network underlying wood development. The present study provides a detailed comparative description of the changes that occur in genes transcription and the biosynthesis of cell-wall-related compounds during xylogenesis in <i>Populus trichocarpa</i> pioneer roots and stems. Even though results of microarray analysis indicated that only approximately 10% of the differentially expressed genes were common to both organs, many fundamental mechanisms were similar; e.g. the pattern of expression of genes involved in the biosynthesis of cell wall proteins, polysaccharides, and lignins. Gas chromatography time-of-flight mass spectrometry (GC-TOF-MS) shows that the composition of monosaccharides was also very similar, with an increasing amount of xylose building secondary cell wall hemicellulose and pectins, especially in the stems. While hemicellulose degradation was typical for stems, possibly due to the intensive level of cell wall lignification. Notably, the main component of lignins in roots were guiacyl units, while syringyl units were dominant in stems, where fibers are especially needed for support. Our study is the first comprehensive analysis, at the structural and molecular level, of xylogenesis in under- and aboveground tree parts, and clearly reveals the great complexity of molecular mechanisms underlying cell wall formation and modification during xylogenesis in different plant organs.</AbstractText><CopyrightInformation>Copyright © 2019 Marzec-Schmidt, Ludwików, Wojciechowska, Kasprowicz-Maluśki, Mucha and Bagniewska-Zadworna.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Marzec-Schmidt</LastName><ForeName>Katarzyna</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ludwików</LastName><ForeName>Agnieszka</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Biotechnology, Faculty of Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wojciechowska</LastName><ForeName>Natalia</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kasprowicz-Maluśki</LastName><ForeName>Anna</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of Molecular and Cellular Biology, Faculty of Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mucha</LastName><ForeName>Joanna</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Laboratory of Ecology, Institute of Dendrology, Polish Academy of Science, Kórnik, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bagniewska-Zadworna</LastName><ForeName>Agnieszka</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Department of General Botany, Faculty of Biology, Institute of Experimental Biology, Adam Mickiewicz University, Poznań, Poland.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>11</Month><Day>12</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Plant Sci</MedlineTA><NlmUniqueID>101568200</NlmUniqueID><ISSNLinking>1664-462X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Populus trichocarpa</Keyword><Keyword MajorTopicYN="N">cell wall biogenesis</Keyword><Keyword MajorTopicYN="N">microarrays</Keyword><Keyword MajorTopicYN="N">wood</Keyword><Keyword MajorTopicYN="N">xylogenesis</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2019</Year><Month>07</Month><Day>01</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2019</Year><Month>10</Month><Day>14</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>11</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>11</Month><Day>30</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>11</Month><Day>30</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">31781142</ArticleId><ArticleId IdType="doi">10.3389/fpls.2019.01419</ArticleId><ArticleId IdType="pmc">PMC6861220</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Ann 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IdType="pubmed">15734915</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Pologne</li></country></list><tree><country name="Pologne"><noRegion><name sortKey="Marzec Schmidt, Katarzyna" sort="Marzec Schmidt, Katarzyna" uniqKey="Marzec Schmidt K" first="Katarzyna" last="Marzec-Schmidt">Katarzyna Marzec-Schmidt</name></noRegion><name sortKey="Bagniewska Zadworna, Agnieszka" sort="Bagniewska Zadworna, Agnieszka" uniqKey="Bagniewska Zadworna A" first="Agnieszka" last="Bagniewska-Zadworna">Agnieszka Bagniewska-Zadworna</name><name sortKey="Kasprowicz Malu Ki, Anna" sort="Kasprowicz Malu Ki, Anna" uniqKey="Kasprowicz Malu Ki A" first="Anna" last="Kasprowicz-Malu Ki">Anna Kasprowicz-Malu Ki</name><name sortKey="Ludwik W, Agnieszka" sort="Ludwik W, Agnieszka" uniqKey="Ludwik W A" first="Agnieszka" last="Ludwik W">Agnieszka Ludwik W</name><name sortKey="Mucha, Joanna" sort="Mucha, Joanna" uniqKey="Mucha J" first="Joanna" last="Mucha">Joanna Mucha</name><name sortKey="Wojciechowska, Natalia" sort="Wojciechowska, Natalia" uniqKey="Wojciechowska N" first="Natalia" last="Wojciechowska">Natalia Wojciechowska</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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